AD brain

Visualize and explore snRNA-Seq datasets from our publication:

Kun Leng, Emmy Li, Rana Eser, Antonia Piergies, Rene Sit, Michelle Tan, Norma Neff, Song Hua Li, Roberta Diehl Rodriguez, Claudia Kimie Suemoto, Renata Elaine Paraizo Leite, Carlos A. Pasqualucci, William W. Seeley, Salvatore Spina, Helmut Heinsen, Lea T. Grinberg, Martin Kampmann
Nat Neurosci. 2021 Feb;24(2):276-287.
  Entorhinal Cortex (EC) Superior Frontal Gyrus (SFG)
All cells Explore Explore
Excitatory neurons Explore Explore
Inhibitory neurons Explore Explore
Astrocytes Explore Explore
Microglia Explore Explore
Oligodendrocytes Explore Explore


Download the raw data at NCBI GEO: GSE147528

Download single-cell data after quality control at under the Synapse ID syn21788402.

RData objects, which have the raw counts and cluster assignments can also be downloaded from Synapse.